Visualise pathways informations
pathway.visualization(
x,
title = paste("Pathways:", paste(names(pathways), collapse = ", ", sep = "")),
file = NA,
pathways.color = "Set2",
aggregate.pathways,
pathways,
...
)
Arguments
- x
A TRONCO complian dataset
- title
Plot title
- file
To generate a PDF a filename have to be given
- pathways.color
A RColorBrewer color palette
- aggregate.pathways
Boolean parameter
- pathways
Pathways
- ...
Additional parameters